STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZE42_14077Vps39_1 domain-containing protein. (91 aa)    
Predicted Functional Partners:
AZE42_01011
Uncharacterized protein.
   
 0.915
AZE42_10003
E3 ubiquitin-protein ligase PEP5.
   
 0.902
AZE42_06848
Vacuolar protein sorting-associated protein 41; Required for vacuolar assembly and vacuolar traffic. Belongs to the VPS41 family.
   
 0.899
AZE42_00083
Uncharacterized protein.
   
 0.899
SEC1
Vacuolar sorting protein VPS33/slp1; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.895
AZE42_13487
Uncharacterized protein.
 
      0.842
AZE42_13436
CNH domain-containing protein.
 
      0.833
AZE42_01056
Uncharacterized protein.
    
 
 0.812
AZE42_00557
t-SNARE coiled-coil homology domain-containing protein.
    
 
 0.801
AZE42_07099
Uncharacterized protein.
    
 
 0.782
Your Current Organism:
Rhizopogon vesiculosus
NCBI taxonomy Id: 180088
Other names: R. vesiculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.