AZE42_11931 protein (Rhizopogon vesiculosus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

AZE42_11931

Glyco_18 domain-containing protein; Belongs to the glycosyl hydrolase 18 family. (325 aa)

Predicted Functional Partners:

AZE42_07226

0.790

AZE42_02859

0.777

AZE42_00576

0.766

AZE42_00109

0.730

AZE42_02830

0.728

AZE42_05775

0.675

AZE42_04811

0.669

AZE42_02343

0.658

AZE42_00620

0.657

AZE42_09743

0.645

Your Current Organism:

Rhizopogon vesiculosus

NCBI taxonomy Id: 180088
Other names: R. vesiculosus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AZE42_00109	AZE42_00576	A0A1J8QRN7	A0A1J8Q8K2	Uncharacterized protein; Belongs to the cytochrome c oxidase subunit 6A family.	Uncharacterized protein.	0.999
AZE42_00109	AZE42_00620	A0A1J8QRN7	A0A1J8Q4L3	Uncharacterized protein; Belongs to the cytochrome c oxidase subunit 6A family.	Uncharacterized protein.	0.999
AZE42_00109	AZE42_02343	A0A1J8QRN7	A0A1J8QM99	Uncharacterized protein; Belongs to the cytochrome c oxidase subunit 6A family.	Uncharacterized protein; Belongs to the peptidase M16 family.	0.997
AZE42_00109	AZE42_02830	A0A1J8QRN7	A0A1J8QDC3	Uncharacterized protein; Belongs to the cytochrome c oxidase subunit 6A family.	Uncharacterized protein.	0.999
AZE42_00109	AZE42_02859	A0A1J8QRN7	A0A1J8PHP2	Uncharacterized protein; Belongs to the cytochrome c oxidase subunit 6A family.	C2H2-type domain-containing protein.	0.999
AZE42_00109	AZE42_04811	A0A1J8QRN7	A0A1J8R0J4	Uncharacterized protein; Belongs to the cytochrome c oxidase subunit 6A family.	Uncharacterized protein.	0.959
AZE42_00109	AZE42_05775	A0A1J8QRN7	A0A1J8PQN9	Uncharacterized protein; Belongs to the cytochrome c oxidase subunit 6A family.	Uncharacterized protein.	0.999
AZE42_00109	AZE42_07226	A0A1J8QRN7	A0A1J8PLK3	Uncharacterized protein; Belongs to the cytochrome c oxidase subunit 6A family.	Cytochrome c oxidase subunit; This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.	0.999
AZE42_00109	AZE42_09743	A0A1J8QRN7	A0A1J8QLS0	Uncharacterized protein; Belongs to the cytochrome c oxidase subunit 6A family.	Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.	0.999
AZE42_00109	AZE42_11931	A0A1J8QRN7	A0A1J8R0V5	Uncharacterized protein; Belongs to the cytochrome c oxidase subunit 6A family.	Glyco_18 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.	0.730
AZE42_00576	AZE42_00109	A0A1J8Q8K2	A0A1J8QRN7	Uncharacterized protein.	Uncharacterized protein; Belongs to the cytochrome c oxidase subunit 6A family.	0.999
AZE42_00576	AZE42_00620	A0A1J8Q8K2	A0A1J8Q4L3	Uncharacterized protein.	Uncharacterized protein.	0.998
AZE42_00576	AZE42_02343	A0A1J8Q8K2	A0A1J8QM99	Uncharacterized protein.	Uncharacterized protein; Belongs to the peptidase M16 family.	0.981
AZE42_00576	AZE42_02830	A0A1J8Q8K2	A0A1J8QDC3	Uncharacterized protein.	Uncharacterized protein.	0.999
AZE42_00576	AZE42_02859	A0A1J8Q8K2	A0A1J8PHP2	Uncharacterized protein.	C2H2-type domain-containing protein.	0.999
AZE42_00576	AZE42_04811	A0A1J8Q8K2	A0A1J8R0J4	Uncharacterized protein.	Uncharacterized protein.	0.974
AZE42_00576	AZE42_05775	A0A1J8Q8K2	A0A1J8PQN9	Uncharacterized protein.	Uncharacterized protein.	0.999
AZE42_00576	AZE42_07226	A0A1J8Q8K2	A0A1J8PLK3	Uncharacterized protein.	Cytochrome c oxidase subunit; This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.	0.999
AZE42_00576	AZE42_09743	A0A1J8Q8K2	A0A1J8QLS0	Uncharacterized protein.	Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.	0.998
AZE42_00576	AZE42_11931	A0A1J8Q8K2	A0A1J8R0V5	Uncharacterized protein.	Glyco_18 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.	0.766