STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZE42_12347Uncharacterized protein. (94 aa)    
Predicted Functional Partners:
AZE42_02884
Uncharacterized protein.
    
 0.594
AZE42_02380
RRM domain-containing protein.
    
 
 0.557
AZE42_05326
Serine/threonine-protein phosphatase.
    
  0.543
AZE42_09266
Metallophos domain-containing protein.
    
  0.543
AZE42_05907
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.543
AZE42_05423
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
     
 0.468
AZE42_10788
BetaGal_dom2 domain-containing protein.
     
 0.463
AZE42_11676
WD_REPEATS_REGION domain-containing protein.
    
   0.428
AZE42_03070
WD_REPEATS_REGION domain-containing protein.
    
   0.428
Your Current Organism:
Rhizopogon vesiculosus
NCBI taxonomy Id: 180088
Other names: R. vesiculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.