STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJZ62822.1TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (188 aa)    
Predicted Functional Partners:
OJZ62821.1
acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.695
OJZ62418.1
MxaD family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.564
OJZ68491.1
SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.498
OJZ62823.1
Diacylglycerol acyltransferase/mycolyltransferase Ag85A; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.470
OJZ61967.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.430
Your Current Organism:
Mycolicibacterium diernhoferi
NCBI taxonomy Id: 1801
Other names: ATCC 19340, CIP 105384, DSM 43524, HAMBI 2269, IFO 14756, JCM 6371, M. diernhoferi, Mycobacterium diernhoferi, NBRC 14756, strain 41001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.