STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGH96412.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (373 aa)    
Predicted Functional Partners:
A2039_03885
Cysteine desulfurase NifS; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.730
OGH93898.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 
 0.560
OGH98961.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 
 0.548
OGH96122.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 
 0.545
A2039_05245
Transcription-repair coupling factor; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the 5'-nucleotidase family.
       0.535
OGH96416.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.512
OGH97736.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 
 0.507
murC
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
  
    0.462
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
  
    0.447
OGH95154.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 
 0.423
Your Current Organism:
Melainabacteria bacterium GWA2349
NCBI taxonomy Id: 1801604
Other names: C. Melainabacteria bacterium GWA2_34_9, Candidatus Melainabacteria bacterium GWA2_34_9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.