STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGI19519.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (376 aa)    
Predicted Functional Partners:
OGI19443.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
OGI19442.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
   
 0.933
OGI20679.1
LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.931
OGI19441.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
   
 0.587
OGI20633.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.571
OGI19086.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.460
OGI19798.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.420
Your Current Organism:
Melainabacteria bacterium RIFCSPHIGHO202FULL3412
NCBI taxonomy Id: 1801607
Other names: C. Melainabacteria bacterium RIFCSPHIGHO2_02_FULL_34_12, Candidatus Melainabacteria bacterium RIFCSPHIGHO2_02_FULL_34_12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.