STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI17226.1Amino acid ABC transporter membrane protein 1, PAAT family (TC 3.A.1.3.-). (226 aa)    
Predicted Functional Partners:
SFI17251.1
Amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-).
  0.991
SFI17215.1
Polar amino acid transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 
  0.955
SFI42482.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
  0.948
SFH60613.1
Polar amino acid transport system ATP-binding protein.
 
  0.947
SFI05855.1
L-glutamate ABC transporter ATP-binding protein.
 
  0.944
SFI17236.1
Polar amino acid transport system permease protein.
 
  
 
0.940
SFI36280.1
Amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-); Belongs to the bacterial solute-binding protein 3 family.
 
  0.937
SFH72660.1
Polar amino acid transport system ATP-binding protein.
 
  0.925
SFI04442.1
Polar amino acid transport system ATP-binding protein.
 
  0.923
SFI00664.1
Amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-); Belongs to the bacterial solute-binding protein 3 family.
 
  0.903
Your Current Organism:
Collimonas sp. OK307
NCBI taxonomy Id: 1801620
Other names: C. sp. OK307
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