STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
petEPlastocyanin precursor. (119 aa)    
Predicted Functional Partners:
petA
Apocytochrome f precursor; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.
  
 
   0.948
psaF
Photosystem I reaction center subunit III precursor.
   
 
 0.924
psaE
Photosystem I reaction center subunit IV; Stabilizes the interaction between PsaC and the PSI core, assists the docking of the ferredoxin to PSI and interacts with ferredoxin-NADP oxidoreductase; Belongs to the PsaE family.
  
 
 0.783
petJ_2
Cytochrome c6.
     
 0.688
KZR91072.1
NAD dependent epimerase/dehydratase family protein.
       0.687
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
       0.687
petF
Ferredoxin.
    
 
 0.629
KZR85805.1
Ferredoxin.
    
 
 0.629
KZR85416.1
CDP-6-deoxy-delta-3,4-glucoseen reductase.
  
  
  0.549
KZR89646.1
Ferredoxin-1.
  
 
 
 0.539
Your Current Organism:
Synechococcus sp. MITS9508
NCBI taxonomy Id: 1801629
Other names: S. sp. MIT S9508, Synechococcus sp. MIT S9508
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