Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KZR89721.1 | ylmA | MITS9508_01328 | MITS9508_01327 | ZIP Zinc transporter. | Putative ABC transporter ATP-binding protein YlmA. | 0.594 |
cysA_1 | msbA_1 | MITS9508_00259 | MITS9508_00527 | Sulfate/thiosulfate import ATP-binding protein CysA; Belongs to the ABC transporter superfamily. | Lipid A export ATP-binding/permease protein MsbA. | 0.464 |
cysA_1 | ugpC_1 | MITS9508_00259 | MITS9508_01264 | Sulfate/thiosulfate import ATP-binding protein CysA; Belongs to the ABC transporter superfamily. | Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily. | 0.565 |
cysA_1 | ugpC_2 | MITS9508_00259 | MITS9508_01860 | Sulfate/thiosulfate import ATP-binding protein CysA; Belongs to the ABC transporter superfamily. | Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily. | 0.583 |
cysA_1 | ylmA | MITS9508_00259 | MITS9508_01327 | Sulfate/thiosulfate import ATP-binding protein CysA; Belongs to the ABC transporter superfamily. | Putative ABC transporter ATP-binding protein YlmA. | 0.572 |
ecfA1_2 | msbA_1 | MITS9508_02052 | MITS9508_00527 | Energy-coupling factor transporter ATP-binding protein EcfA1. | Lipid A export ATP-binding/permease protein MsbA. | 0.452 |
ecfA1_2 | ylmA | MITS9508_02052 | MITS9508_01327 | Energy-coupling factor transporter ATP-binding protein EcfA1. | Putative ABC transporter ATP-binding protein YlmA. | 0.738 |
msbA_1 | cysA_1 | MITS9508_00527 | MITS9508_00259 | Lipid A export ATP-binding/permease protein MsbA. | Sulfate/thiosulfate import ATP-binding protein CysA; Belongs to the ABC transporter superfamily. | 0.464 |
msbA_1 | ecfA1_2 | MITS9508_00527 | MITS9508_02052 | Lipid A export ATP-binding/permease protein MsbA. | Energy-coupling factor transporter ATP-binding protein EcfA1. | 0.452 |
msbA_1 | ylmA | MITS9508_00527 | MITS9508_01327 | Lipid A export ATP-binding/permease protein MsbA. | Putative ABC transporter ATP-binding protein YlmA. | 0.626 |
nudI | ylmA | MITS9508_01326 | MITS9508_01327 | Nucleoside triphosphatase NudI. | Putative ABC transporter ATP-binding protein YlmA. | 0.417 |
ugpC_1 | cysA_1 | MITS9508_01264 | MITS9508_00259 | Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily. | Sulfate/thiosulfate import ATP-binding protein CysA; Belongs to the ABC transporter superfamily. | 0.565 |
ugpC_1 | ugpC_2 | MITS9508_01264 | MITS9508_01860 | Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily. | Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily. | 0.693 |
ugpC_1 | ylmA | MITS9508_01264 | MITS9508_01327 | Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily. | Putative ABC transporter ATP-binding protein YlmA. | 0.476 |
ugpC_2 | cysA_1 | MITS9508_01860 | MITS9508_00259 | Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily. | Sulfate/thiosulfate import ATP-binding protein CysA; Belongs to the ABC transporter superfamily. | 0.583 |
ugpC_2 | ugpC_1 | MITS9508_01860 | MITS9508_01264 | Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily. | Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily. | 0.693 |
ugpC_2 | ylmA | MITS9508_01860 | MITS9508_01327 | Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily. | Putative ABC transporter ATP-binding protein YlmA. | 0.427 |
ylmA | KZR89721.1 | MITS9508_01327 | MITS9508_01328 | Putative ABC transporter ATP-binding protein YlmA. | ZIP Zinc transporter. | 0.594 |
ylmA | cysA_1 | MITS9508_01327 | MITS9508_00259 | Putative ABC transporter ATP-binding protein YlmA. | Sulfate/thiosulfate import ATP-binding protein CysA; Belongs to the ABC transporter superfamily. | 0.572 |
ylmA | ecfA1_2 | MITS9508_01327 | MITS9508_02052 | Putative ABC transporter ATP-binding protein YlmA. | Energy-coupling factor transporter ATP-binding protein EcfA1. | 0.738 |
page 1 of 2