STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ36544.1NADPH-dependent glutamate synthase beta chain. (863 aa)    
Predicted Functional Partners:
SJZ35092.1
NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein.
 
 
 0.984
SJZ38447.1
Dihydropyrimidine dehydrogenase (NAD+) subunit PreA.
 0.969
SJZ44565.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
 
 
 0.960
SJZ41830.1
Anaerobic sulfite reductase subunit B.
 
 0.922
SJZ42071.1
Dihydroorotate dehydrogenase electron transfer subunit.
 
 0.921
rnfB
Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
 
 
 0.919
SJZ90106.1
Uncharacterised ACR, YkgG family COG1556.
  
 0.913
SJZ80285.1
Phosphoadenosine phosphosulfate reductase.
  
 
 0.892
SJZ36552.1
Thiosulfate/3-mercaptopyruvate sulfurtransferase.
 
  
 0.887
SJZ36591.1
Uncharacterized membrane protein YdjX, TVP38/TMEM64 family, SNARE-associated domain.
     0.875
Your Current Organism:
Cetobacterium ceti
NCBI taxonomy Id: 180163
Other names: ATCC 700028, C. ceti, NCFB 3026, NCIMB 703026, strain M-3333
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