STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ38331.1Transcriptional antiterminator. (468 aa)    
Predicted Functional Partners:
SJZ38231.1
PTS system IIC component, L-Asc family (TC 4.A.7).
 
  
 0.830
SJZ38196.1
PTS system IIA component, L-Asc family.
 
 
  0.820
SJZ38213.1
PTS system IIB component, L-Asc family.
 
 
 0.817
SKA05695.1
Transcriptional antiterminator.
  
 
  0.783
SKA11640.1
Transcriptional antiterminator.
  
 
  0.772
SJZ52988.1
PTS system, cellobiose-specific IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
  
 0.539
SJZ38346.1
Conserved hypothetical integral membrane protein.
       0.515
SJZ53017.1
PTS system, cellobiose-specific IIB component.
 
    0.489
SJZ77522.1
PTS system, cellobiose-specific IIB component.
 
    0.486
SJZ36275.1
PTS system, D-glucosamine-specific IIC component.
  
 
 0.474
Your Current Organism:
Cetobacterium ceti
NCBI taxonomy Id: 180163
Other names: ATCC 700028, C. ceti, NCFB 3026, NCIMB 703026, strain M-3333
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.