STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ52911.1Isoaspartyl peptidase or L-asparaginase, Ntn-hydrolase superfamily. (318 aa)    
Predicted Functional Partners:
SJZ52988.1
PTS system, cellobiose-specific IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
     0.881
SJZ52891.1
PTS system, cellobiose-specific IIA component.
 
     0.817
SJZ53017.1
PTS system, cellobiose-specific IIB component.
 
     0.812
SJZ53056.1
Succinyl-diaminopimelate desuccinylase.
  
    0.785
SJZ42878.1
Ankyrin repeat-containing protein.
  
  
  0.641
SJZ35997.1
L-asparaginase.
     
 0.615
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
    
  0.589
SJZ53079.1
Hypothetical protein.
       0.568
SJZ52693.1
Aspartate aminotransferase.
   
 
 0.566
SJZ36008.1
Aspartate ammonia-lyase.
     
 0.561
Your Current Organism:
Cetobacterium ceti
NCBI taxonomy Id: 180163
Other names: ATCC 700028, C. ceti, NCFB 3026, NCIMB 703026, strain M-3333
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