Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SJZ35448.1 | SJZ46036.1 | SAMN02745174_00196 | SAMN02745174_00595 | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | Chorismate mutase. | 0.473 |
| SJZ35448.1 | SJZ54722.1 | SAMN02745174_00196 | SAMN02745174_00877 | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | DNA-binding protein HU-beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 0.447 |
| SJZ35448.1 | polA | SAMN02745174_00196 | SAMN02745174_00347 | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.586 |
| SJZ35448.1 | rpsT | SAMN02745174_00196 | SAMN02745174_00518 | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | Small subunit ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 0.766 |
| SJZ46036.1 | SJZ35448.1 | SAMN02745174_00595 | SAMN02745174_00196 | Chorismate mutase. | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.473 |
| SJZ46036.1 | SJZ54722.1 | SAMN02745174_00595 | SAMN02745174_00877 | Chorismate mutase. | DNA-binding protein HU-beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 0.475 |
| SJZ46036.1 | rpsT | SAMN02745174_00595 | SAMN02745174_00518 | Chorismate mutase. | Small subunit ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 0.431 |
| SJZ54722.1 | SJZ35448.1 | SAMN02745174_00877 | SAMN02745174_00196 | DNA-binding protein HU-beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.447 |
| SJZ54722.1 | SJZ46036.1 | SAMN02745174_00877 | SAMN02745174_00595 | DNA-binding protein HU-beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Chorismate mutase. | 0.475 |
| SJZ54722.1 | polA | SAMN02745174_00877 | SAMN02745174_00347 | DNA-binding protein HU-beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.433 |
| SJZ54722.1 | rpsT | SAMN02745174_00877 | SAMN02745174_00518 | DNA-binding protein HU-beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Small subunit ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 0.480 |
| polA | SJZ35448.1 | SAMN02745174_00347 | SAMN02745174_00196 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.586 |
| polA | SJZ54722.1 | SAMN02745174_00347 | SAMN02745174_00877 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | DNA-binding protein HU-beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 0.433 |
| rpsT | SJZ35448.1 | SAMN02745174_00518 | SAMN02745174_00196 | Small subunit ribosomal protein S20; Binds directly to 16S ribosomal RNA. | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.766 |
| rpsT | SJZ46036.1 | SAMN02745174_00518 | SAMN02745174_00595 | Small subunit ribosomal protein S20; Binds directly to 16S ribosomal RNA. | Chorismate mutase. | 0.431 |
| rpsT | SJZ54722.1 | SAMN02745174_00518 | SAMN02745174_00877 | Small subunit ribosomal protein S20; Binds directly to 16S ribosomal RNA. | DNA-binding protein HU-beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 0.480 |