STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ65954.1Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. (356 aa)    
Predicted Functional Partners:
SJZ66009.1
Simple sugar transport system ATP-binding protein.
 
 0.974
SJZ66029.1
Protein of unknown function.
 
 
 0.927
SJZ65981.1
Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
    
0.827
SJZ65919.1
Hypothetical protein.
       0.773
rbsD
D-ribose pyranase; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
  
  
 0.618
SJZ53523.1
Methyl-galactoside transport system substrate-binding protein.
  
 0.612
SJZ66184.1
Ribose transport system substrate-binding protein.
  
 0.612
SKA05676.1
Ribose transport system substrate-binding protein.
  
 0.612
SJZ53562.1
Methyl-galactoside transport system ATP-binding protein.
  
 0.542
rbsA
Ribose transport system ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  
 0.542
Your Current Organism:
Cetobacterium ceti
NCBI taxonomy Id: 180163
Other names: ATCC 700028, C. ceti, NCFB 3026, NCIMB 703026, strain M-3333
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.