STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ66318.1Transcriptional regulator, LacI family. (329 aa)    
Predicted Functional Partners:
SJZ72562.1
LacI family transcriptional regulator.
  
     0.762
SJZ66184.1
Ribose transport system substrate-binding protein.
 
 
 0.752
SJZ36275.1
PTS system, D-glucosamine-specific IIC component.
  
 
 0.702
SJZ54074.1
PTS system N-acetylglucosamine-specific IIB component, Glc family /PTS system N-acetylglucosamine-specific IIC component, Glc family.
  
 
 0.702
SJZ65849.1
PTS system, glucose-specific IIC component.
  
 
 0.702
SJZ66216.1
Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.657
SJZ66251.1
Rhamnulokinase.
   
 
 0.651
SJZ84492.1
Phosphocarrier protein.
   
 
 0.633
SJZ91841.1
Phosphocarrier protein HPr.
   
 
 0.633
rbsA
Ribose transport system ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  
 
 0.614
Your Current Organism:
Cetobacterium ceti
NCBI taxonomy Id: 180163
Other names: ATCC 700028, C. ceti, NCFB 3026, NCIMB 703026, strain M-3333
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.