STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ70071.1Sulfatase. (463 aa)    
Predicted Functional Partners:
SJZ54863.1
Uncharacterized protein.
 
   0.920
SJZ70006.1
2-deoxy-D-gluconate 3-dehydrogenase.
  
 
 0.830
SJZ70172.1
Unsaturated chondroitin disaccharide hydrolase.
  
  0.804
SJZ70028.1
Two-component response regulator, YesN/AraC family, consists of REC and AraC-type DNA-binding domains.
 
     0.800
SJZ94363.1
Sialidase-1.
  
 
  0.654
kduI
4-deoxy-L-threo-5-hexulose uronate isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.
       0.630
SJZ89376.1
2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase.
 
      0.565
SJZ69943.1
Arylsulfatase A.
 
    
0.552
SJZ66488.1
Beta-galactosidase.
 
 0.522
SJZ75927.1
Beta-galactosidase.
 
 0.517
Your Current Organism:
Cetobacterium ceti
NCBI taxonomy Id: 180163
Other names: ATCC 700028, C. ceti, NCFB 3026, NCIMB 703026, strain M-3333
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.