Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SJZ35997.1 | SJZ52693.1 | SAMN02745174_00231 | SAMN02745174_00805 | L-asparaginase. | Aspartate aminotransferase. | 0.571 |
SJZ35997.1 | SJZ75411.1 | SAMN02745174_00231 | SAMN02745174_01456 | L-asparaginase. | Aspartate aminotransferase. | 0.656 |
SJZ35997.1 | SJZ84739.1 | SAMN02745174_00231 | SAMN02745174_01739 | L-asparaginase. | Predicted amidohydrolase. | 0.563 |
SJZ35997.1 | argG | SAMN02745174_00231 | SAMN02745174_01166 | L-asparaginase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.591 |
SJZ35997.1 | asnA | SAMN02745174_00231 | SAMN02745174_01344 | L-asparaginase. | Aspartate-ammonia ligase. | 0.762 |
SJZ35997.1 | carB | SAMN02745174_00231 | SAMN02745174_00447 | L-asparaginase. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.557 |
SJZ35997.1 | pyrB | SAMN02745174_00231 | SAMN02745174_00435 | L-asparaginase. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.655 |
SJZ52693.1 | SJZ35997.1 | SAMN02745174_00805 | SAMN02745174_00231 | Aspartate aminotransferase. | L-asparaginase. | 0.571 |
SJZ52693.1 | SJZ75411.1 | SAMN02745174_00805 | SAMN02745174_01456 | Aspartate aminotransferase. | Aspartate aminotransferase. | 0.711 |
SJZ52693.1 | SJZ84739.1 | SAMN02745174_00805 | SAMN02745174_01739 | Aspartate aminotransferase. | Predicted amidohydrolase. | 0.566 |
SJZ52693.1 | argG | SAMN02745174_00805 | SAMN02745174_01166 | Aspartate aminotransferase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.629 |
SJZ52693.1 | asnA | SAMN02745174_00805 | SAMN02745174_01344 | Aspartate aminotransferase. | Aspartate-ammonia ligase. | 0.762 |
SJZ52693.1 | carB | SAMN02745174_00805 | SAMN02745174_00447 | Aspartate aminotransferase. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.587 |
SJZ52693.1 | purA | SAMN02745174_00805 | SAMN02745174_00044 | Aspartate aminotransferase. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.660 |
SJZ70802.1 | SJZ70853.1 | SAMN02745174_01341 | SAMN02745174_01342 | Iron-only hydrogenase maturation protein HydF. | Iron-only hydrogenase maturation protein HydG. | 0.978 |
SJZ70802.1 | asnA | SAMN02745174_01341 | SAMN02745174_01344 | Iron-only hydrogenase maturation protein HydF. | Aspartate-ammonia ligase. | 0.503 |
SJZ70853.1 | SJZ70802.1 | SAMN02745174_01342 | SAMN02745174_01341 | Iron-only hydrogenase maturation protein HydG. | Iron-only hydrogenase maturation protein HydF. | 0.978 |
SJZ70853.1 | asnA | SAMN02745174_01342 | SAMN02745174_01344 | Iron-only hydrogenase maturation protein HydG. | Aspartate-ammonia ligase. | 0.503 |
SJZ75411.1 | SJZ35997.1 | SAMN02745174_01456 | SAMN02745174_00231 | Aspartate aminotransferase. | L-asparaginase. | 0.656 |
SJZ75411.1 | SJZ52693.1 | SAMN02745174_01456 | SAMN02745174_00805 | Aspartate aminotransferase. | Aspartate aminotransferase. | 0.711 |
page 1 of 4