STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ76649.1Hypothetical protein. (471 aa)    
Predicted Functional Partners:
SJZ46036.1
Chorismate mutase.
  
 
 0.792
SJZ75411.1
Aspartate aminotransferase.
  
0.639
SJZ52693.1
Aspartate aminotransferase.
  
 0.595
SJZ76632.1
Hypothetical protein.
       0.584
SJZ36207.1
FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase.
 
 
 0.576
SJZ76665.1
Methionine-gamma-lyase.
  
  
 0.573
SJZ61299.1
Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).
   
 
 0.540
SJZ86340.1
Para-aminobenzoate synthetase component 2.
   
 
 0.536
SJZ86365.1
Aminodeoxychorismate synthase, subunit I.
   
 
 0.535
SJZ71176.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
  
 
 0.533
Your Current Organism:
Cetobacterium ceti
NCBI taxonomy Id: 180163
Other names: ATCC 700028, C. ceti, NCFB 3026, NCIMB 703026, strain M-3333
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