STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ80822.1MinD superfamily P-loop ATPase, contains an inserted ferredoxin domain. (277 aa)    
Predicted Functional Partners:
SJZ80857.1
Predicted DNA-binding protein, UPF0251 family.
 
  
 0.945
SJZ80842.1
Predicted Fe-Mo cluster-binding protein, NifX family.
 
  
 0.944
SJZ80794.1
Predicted Fe-Mo cluster-binding protein, NifX family.
 
  
 0.928
SJZ44565.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.844
SJZ80813.1
MinD superfamily P-loop ATPase, contains an inserted ferredoxin domain.
 
    
0.823
SJZ35092.1
NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein.
    
 0.758
SJZ63376.1
7, 8-dihydropterin-6-yl-methyl-4-(beta-D- ribofuranosyl)aminobenzene 5'-phosphate synthase.
 
     0.758
SJZ38447.1
Dihydropyrimidine dehydrogenase (NAD+) subunit PreA.
    
  0.681
SJZ36544.1
NADPH-dependent glutamate synthase beta chain.
  
 0.667
SJZ74944.1
NADPH-dependent glutamate synthase beta chain.
  
 0.667
Your Current Organism:
Cetobacterium ceti
NCBI taxonomy Id: 180163
Other names: ATCC 700028, C. ceti, NCFB 3026, NCIMB 703026, strain M-3333
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.