STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ81126.1Protein kinase domain-containing protein. (669 aa)    
Predicted Functional Partners:
SJZ81156.1
Protein phosphatase 2C.
 
    0.935
SJZ81140.1
Uncharacterized conserved protein YegL, contains vWA domain of TerY type.
 
     0.928
SJZ81084.1
Uncharacterized conserved protein YegL, contains vWA domain of TerY type.
 
     0.900
SJZ44565.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.865
SJZ58547.1
Hypothetical protein.
 
    0.750
SJZ42861.1
Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains.
  
    0.748
SJZ36275.1
PTS system, D-glucosamine-specific IIC component.
  
 
  0.701
SJZ54074.1
PTS system N-acetylglucosamine-specific IIB component, Glc family /PTS system N-acetylglucosamine-specific IIC component, Glc family.
  
 
  0.701
SJZ65849.1
PTS system, glucose-specific IIC component.
  
 
  0.701
SJZ35448.1
GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
  
 
 0.668
Your Current Organism:
Cetobacterium ceti
NCBI taxonomy Id: 180163
Other names: ATCC 700028, C. ceti, NCFB 3026, NCIMB 703026, strain M-3333
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