Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SJZ45785.1 | bioA | SAMN02745174_00585 | SAMN02745174_02121 | 8-amino-7-oxononanoate synthase. | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily. | 0.986 |
SJZ45785.1 | tdk | SAMN02745174_00585 | SAMN02745174_01664 | 8-amino-7-oxononanoate synthase. | Thymidine kinase. | 0.832 |
SJZ47782.1 | SJZ51443.1 | SAMN02745174_00680 | SAMN02745174_00762 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase; Belongs to the 5'-nucleotidase family. | 0.679 |
SJZ47782.1 | SJZ64801.1 | SAMN02745174_00680 | SAMN02745174_01164 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase; Belongs to the 5'-nucleotidase family. | 0.679 |
SJZ47782.1 | tdk | SAMN02745174_00680 | SAMN02745174_01664 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Thymidine kinase. | 0.883 |
SJZ51443.1 | SJZ47782.1 | SAMN02745174_00762 | SAMN02745174_00680 | 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase; Belongs to the 5'-nucleotidase family. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.679 |
SJZ51443.1 | SJZ61243.1 | SAMN02745174_00762 | SAMN02745174_01079 | 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase; Belongs to the 5'-nucleotidase family. | dCMP deaminase. | 0.657 |
SJZ51443.1 | SJZ64801.1 | SAMN02745174_00762 | SAMN02745174_01164 | 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase; Belongs to the 5'-nucleotidase family. | 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase; Belongs to the 5'-nucleotidase family. | 0.643 |
SJZ51443.1 | tdk | SAMN02745174_00762 | SAMN02745174_01664 | 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase; Belongs to the 5'-nucleotidase family. | Thymidine kinase. | 0.820 |
SJZ51443.1 | tmk | SAMN02745174_00762 | SAMN02745174_02183 | 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase; Belongs to the 5'-nucleotidase family. | dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.688 |
SJZ61243.1 | SJZ51443.1 | SAMN02745174_01079 | SAMN02745174_00762 | dCMP deaminase. | 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase; Belongs to the 5'-nucleotidase family. | 0.657 |
SJZ61243.1 | SJZ64801.1 | SAMN02745174_01079 | SAMN02745174_01164 | dCMP deaminase. | 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase; Belongs to the 5'-nucleotidase family. | 0.657 |
SJZ61243.1 | dut | SAMN02745174_01079 | SAMN02745174_00612 | dCMP deaminase. | dUTP pyrophosphatase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | 0.659 |
SJZ61243.1 | dut-2 | SAMN02745174_01079 | SAMN02745174_01760 | dCMP deaminase. | dUTP pyrophosphatase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | 0.659 |
SJZ61243.1 | tdk | SAMN02745174_01079 | SAMN02745174_01664 | dCMP deaminase. | Thymidine kinase. | 0.890 |
SJZ61243.1 | tmk | SAMN02745174_01079 | SAMN02745174_02183 | dCMP deaminase. | dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.685 |
SJZ64801.1 | SJZ47782.1 | SAMN02745174_01164 | SAMN02745174_00680 | 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase; Belongs to the 5'-nucleotidase family. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.679 |
SJZ64801.1 | SJZ51443.1 | SAMN02745174_01164 | SAMN02745174_00762 | 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase; Belongs to the 5'-nucleotidase family. | 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase; Belongs to the 5'-nucleotidase family. | 0.643 |
SJZ64801.1 | SJZ61243.1 | SAMN02745174_01164 | SAMN02745174_01079 | 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase; Belongs to the 5'-nucleotidase family. | dCMP deaminase. | 0.657 |
SJZ64801.1 | tdk | SAMN02745174_01164 | SAMN02745174_01664 | 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase; Belongs to the 5'-nucleotidase family. | Thymidine kinase. | 0.822 |
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