STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ90121.1Nucleoside-specific channel-forming protein. (280 aa)    
Predicted Functional Partners:
SJZ90137.1
PTS system, mannose/fructose/sorbose family, IIA component.
       0.746
SJZ74333.1
OmpA family protein.
  
   
 0.718
SJZ64716.1
Hypothetical protein.
  
     0.650
SKA00325.1
Hypothetical protein.
  
     0.647
SJZ63264.1
Outer membrane protein.
  
  
 0.613
SJZ35710.1
Tetratricopeptide repeat-containing protein.
  
     0.604
SJZ43638.1
Soluble lytic murein transglycosylase.
  
     0.602
SJZ60671.1
Outer membrane protein.
  
  
 0.586
SJZ67244.1
CysZ protein.
  
     0.566
SJZ43708.1
Long-chain fatty acid transport protein.
  
   
 0.558
Your Current Organism:
Cetobacterium ceti
NCBI taxonomy Id: 180163
Other names: ATCC 700028, C. ceti, NCFB 3026, NCIMB 703026, strain M-3333
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.