STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ95418.1N-acetylmuramoyl-L-alanine amidase. (183 aa)    
Predicted Functional Partners:
SJZ95442.1
Hypothetical protein.
       0.773
SJZ60706.1
LysM domain-containing protein.
  
 
 0.715
SJZ35164.1
Outer membrane lipoprotein-sorting protein.
    
   0.712
SJZ43638.1
Soluble lytic murein transglycosylase.
    
 0.655
SKA00243.1
D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family.
   
 
 0.556
SJZ44354.1
Uncharacterized lipoprotein YddW, UPF0748 family.
    
  0.482
SJZ95402.1
Hypothetical protein.
       0.478
SJZ34382.1
Stage II sporulation protein D.
 
 
 0.437
SJZ95449.1
Abortive infection bacteriophage resistance protein.
       0.413
SJZ51443.1
2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase; Belongs to the 5'-nucleotidase family.
  
 
  0.405
Your Current Organism:
Cetobacterium ceti
NCBI taxonomy Id: 180163
Other names: ATCC 700028, C. ceti, NCFB 3026, NCIMB 703026, strain M-3333
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