STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ96916.1Hypothetical protein. (837 aa)    
Predicted Functional Partners:
SJZ96880.1
Competence/damage-inducible protein cinA; Belongs to the CinA family.
       0.714
SJZ96894.1
Transcriptional regulator, XRE family with cupin sensor.
       0.714
SJZ96951.1
CBS domain signal transduction protein /PTS system IIA component, Fru family.
       0.707
SJZ48570.1
Uncharacterized conserved protein YloU, alkaline shock protein (Asp23) family.
 
  
 0.701
SJZ35710.1
Tetratricopeptide repeat-containing protein.
  
     0.645
SJZ96861.1
Phosphatidylglycerophosphatase A.
       0.618
coaE
dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
       0.612
whiA
Hypothetical protein; Involved in cell division and chromosome segregation.
  
    0.603
SJZ97049.1
Xaa-Pro dipeptidase.
 
     0.602
SJZ96843.1
Putative protease.
       0.585
Your Current Organism:
Cetobacterium ceti
NCBI taxonomy Id: 180163
Other names: ATCC 700028, C. ceti, NCFB 3026, NCIMB 703026, strain M-3333
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