STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA06752.1Phage major capsid protein, HK97 family. (586 aa)    
Predicted Functional Partners:
SKA06718.1
Phage portal protein, HK97 family.
 
 
 0.985
SKA06741.1
Phage Mu protein F like protein.
       0.762
SKA06696.1
Phage terminase, large subunit, PBSX family.
  
    0.646
SKA06678.1
Hypothetical protein.
       0.615
SJZ94892.1
Hypothetical protein.
   
   0.595
SKA01949.1
Hypothetical protein.
   
   0.595
SJZ36997.1
Hypothetical protein.
  
     0.578
SKA06783.1
Hypothetical protein.
       0.543
SKA06765.1
Hypothetical protein.
       0.513
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
      
 0.439
Your Current Organism:
Cetobacterium ceti
NCBI taxonomy Id: 180163
Other names: ATCC 700028, C. ceti, NCFB 3026, NCIMB 703026, strain M-3333
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.