STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA07876.1Hypothetical protein. (112 aa)    
Predicted Functional Partners:
SKA07893.1
Baseplate J-like protein.
       0.773
SKA07911.1
Hypothetical protein.
       0.773
SKA07920.1
Hypothetical protein.
       0.773
SKA07934.1
Hypothetical protein.
       0.773
SKA07791.1
Phage tail tape measure protein, TP901 family, core region.
       0.752
SKA07813.1
Hypothetical protein.
       0.752
SKA07828.1
Hypothetical protein.
       0.752
SKA07840.1
Hypothetical protein.
       0.752
SKA07859.1
Hypothetical protein.
       0.752
SKA07769.1
Hypothetical protein.
       0.469
Your Current Organism:
Cetobacterium ceti
NCBI taxonomy Id: 180163
Other names: ATCC 700028, C. ceti, NCFB 3026, NCIMB 703026, strain M-3333
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.