STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGI12623.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (179 aa)    
Predicted Functional Partners:
kae1
UGMP family protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37; Belongs to the KAE1 / TsaD family.
    
  0.821
OGI12624.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.679
OGI12210.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.624
OGI12626.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
   0.602
OGI12625.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.596
spt4
DNA-directed RNA polymerase subunit E'; Stimulates transcription elongation; Belongs to the archaeal Spt4 family.
       0.596
OGI12628.1
DNA-directed RNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.596
OGI12629.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.596
OGI12630.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.585
OGI12631.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
   0.451
Your Current Organism:
Micrarchaeota archaeon RBG16369
NCBI taxonomy Id: 1801632
Other names: C. Micrarchaeota archaeon RBG_16_36_9, Candidatus Micrarchaeota archaeon RBG_16_36_9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.