STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGI32129.1DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (90 aa)    
Predicted Functional Partners:
OGI33443.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.916
OGI32773.1
DNA topoisomerase I; Catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.901
OGI32418.1
30S ribosomal protein S20; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.828
OGI32897.1
single-stranded-DNA-specific exonuclease RecJ; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.811
OGI32111.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.764
OGI33289.1
Replicative DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.750
OGI33405.1
30S ribosomal protein S15; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.735
OGI32432.1
DNA primase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.733
OGI32772.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.730
OGI32413.1
DNA polymerase I; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.717
Your Current Organism:
Moranbacteria bacterium RIFOXYC12FULL3613
NCBI taxonomy Id: 1801654
Other names: C. Moranbacteria bacterium RIFOXYC12_FULL_36_13, Candidatus Moranbacteria bacterium RIFOXYC12_FULL_36_13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.