STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGB89084.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DegT/DnrJ/EryC1 family. (375 aa)    
Predicted Functional Partners:
OGB89083.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.961
OGB89017.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.948
OGB94333.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.842
OGB92595.1
dTDP-glucose 4,6-dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 
 0.816
OGB89018.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.775
A3H39_06310
Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
  
 0.735
OGB90758.1
Prephenate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.715
OGB89082.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.690
OGB92697.1
GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.690
OGB92602.1
UDP-N-acetylglucosamine 2-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.668
Your Current Organism:
candidate division NC10 bacterium RIFCSPLOWO202FULL6622
NCBI taxonomy Id: 1801658
Other names: c. division NC10 bacterium RIFCSPLOWO2_02_FULL_66_22, candidate division NC10 bacterium RIFCSPLOWO2_02_FULL_66_22
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