STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGB88333.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (147 aa)    
Predicted Functional Partners:
OGB88334.1
glutaminyl-tRNA synthase (glutamine-hydrolyzing) subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.793
OGB93318.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.664
OGB95060.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.664
OGB90733.1
Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.663
OGB92326.1
Cystathionine gamma-synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.660
OGB92340.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.658
prs
Phosphoribosylpyrophosphate synthetase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
   
  0.640
pxpA
Lactam utilization protein LamB; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
    
  0.626
OGB92838.1
UTP--glucose-1-phosphate uridylyltransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.528
OGB88332.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.522
Your Current Organism:
candidate division NC10 bacterium RIFCSPLOWO202FULL6622
NCBI taxonomy Id: 1801658
Other names: c. division NC10 bacterium RIFCSPLOWO2_02_FULL_66_22, candidate division NC10 bacterium RIFCSPLOWO2_02_FULL_66_22
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