STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGZ17327.1Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (184 aa)    
Predicted Functional Partners:
OGZ17326.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.586
OGZ17325.1
Nitroreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.492
OGZ17324.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.457
OGZ17322.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.443
rpmE
50S ribosomal protein L31; Binds the 23S rRNA.
       0.434
OGZ17329.1
Peptide chain release factor 1; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.434
Your Current Organism:
Nealsonbacteria bacterium RBG133615
NCBI taxonomy Id: 1801660
Other names: C. Nealsonbacteria bacterium RBG_13_36_15, Candidatus Nealsonbacteria bacterium RBG_13_36_15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.