STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGW07961.13-deoxy-8-phosphooctulonate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (277 aa)    
Predicted Functional Partners:
OGW10077.1
D-arabinose 5-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.978
OGW07963.1
3-deoxy-manno-octulosonate cytidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.977
OGW10076.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.963
OGW07962.1
CTP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.817
OGW08743.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.816
OGW09280.1
Prephenate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  
 0.815
OGW11238.1
Tetraacyldisaccharide 4'-kinase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
   
 0.783
OGW07845.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.719
OGW09204.1
lipid-A-disaccharide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.679
OGW08237.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.664
Your Current Organism:
Nitrospinae bacterium RIFCSPLOWO2123915
NCBI taxonomy Id: 1801689
Other names: N. bacterium RIFCSPLOWO2_12_39_15, Nitrospinae bacterium RIFCSPLOWO2_12_39_15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.