STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGW09279.1Histidinol-phosphate transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. (360 aa)    
Predicted Functional Partners:
OGW07622.1
Bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.994
hisB
Imidazoleglycerol-phosphate dehydratase; Catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.990
OGW08975.1
Histidinol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.987
OGW09280.1
Prephenate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.977
OGW11299.1
Cobyric acid synthase CobQ; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.947
OGW09275.1
Cytidylate kinase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.932
OGW07618.1
Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.913
OGW07620.1
Imidazole glycerol phosphate synthase subunit HisF; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.908
OGW10551.1
Lipopolysaccharide heptosyltransferase II; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.880
OGW07619.1
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.815
Your Current Organism:
Nitrospinae bacterium RIFCSPLOWO2123915
NCBI taxonomy Id: 1801689
Other names: N. bacterium RIFCSPLOWO2_12_39_15, Nitrospinae bacterium RIFCSPLOWO2_12_39_15
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