STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGW07551.1AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (738 aa)    
Predicted Functional Partners:
OGW08227.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.970
OGW07549.1
Heat-shock protein Hsp20; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.950
OGW11322.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.911
OGW07550.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.903
OGW07553.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.896
OGW10169.1
Histone deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.892
OGW11796.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.886
OGW07547.1
Gas vesicle protein GvpN; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.884
OGW07554.1
Gas vesicle synthesis GvpLGvpF; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.882
OGW09684.1
50S ribosomal protein L10; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.880
Your Current Organism:
Nitrospinae bacterium RIFCSPLOWO2123915
NCBI taxonomy Id: 1801689
Other names: N. bacterium RIFCSPLOWO2_12_39_15, Nitrospinae bacterium RIFCSPLOWO2_12_39_15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.