STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGW07486.130S ribosomal protein S21; Derived by automated computational analysis using gene prediction method: Protein Homology. (60 aa)    
Predicted Functional Partners:
OGW11507.1
30S ribosomal protein S16; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.994
OGW08848.1
30S ribosomal protein S20; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.994
OGW08404.1
30S ribosomal protein S15; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.993
OGW09958.1
30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.992
OGW09168.1
30S ribosomal protein S18; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.992
OGW11646.1
30S ribosomal protein S10; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.992
OGW09687.1
30S ribosomal protein S12; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.991
OGW09166.1
30S ribosomal protein S6; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.991
OGW09688.1
30S ribosomal protein S7; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.989
OGW11623.1
30S ribosomal protein S8; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.989
Your Current Organism:
Nitrospinae bacterium RIFCSPLOWO2123915
NCBI taxonomy Id: 1801689
Other names: N. bacterium RIFCSPLOWO2_12_39_15, Nitrospinae bacterium RIFCSPLOWO2_12_39_15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.