STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGW09167.1Single-stranded DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (136 aa)    
Predicted Functional Partners:
OGW09270.1
DNA polymerase III subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.992
OGW09344.1
DNA topoisomerase I; Catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.989
OGW08015.1
Primosomal protein N; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.982
OGW09166.1
30S ribosomal protein S6; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.976
OGW08995.1
DNA polymerase III, subunit gamma and tau; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.966
OGW09787.1
DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.966
OGW11152.1
Ribonuclease HI; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.862
OGW09169.1
Replicative DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.827
OGW11646.1
30S ribosomal protein S10; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.802
OGW08856.1
DNA polymerase III subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.789
Your Current Organism:
Nitrospinae bacterium RIFCSPLOWO2123915
NCBI taxonomy Id: 1801689
Other names: N. bacterium RIFCSPLOWO2_12_39_15, Nitrospinae bacterium RIFCSPLOWO2_12_39_15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.