STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGW08104.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (415 aa)    
Predicted Functional Partners:
OGW09685.1
DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.890
OGW11635.1
DNA-directed RNA polymerase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.879
OGW09686.1
DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.864
OGW09450.1
DNA-directed RNA polymerase subunit omega; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.857
OGW09769.1
DNA primase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.830
OGW10914.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.728
OGW11151.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.667
OGW10590.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.659
OGW08103.1
Pyruvate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.586
OGW10605.1
Preprotein translocase subunit SecA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.502
Your Current Organism:
Nitrospinae bacterium RIFCSPLOWO2123915
NCBI taxonomy Id: 1801689
Other names: N. bacterium RIFCSPLOWO2_12_39_15, Nitrospinae bacterium RIFCSPLOWO2_12_39_15
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.