STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGW28940.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (212 aa)    
Predicted Functional Partners:
A2X56_11070
Hypothetical protein; Metagenomic; derived from metagenome: subsurface metagenome.
    
  0.764
OGW29522.1
Cytochrome oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.720
OGW29523.1
Cytochrome C oxidase Cbb3; CcoN; FixN; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.
  
  
 0.691
OGW27887.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.623
OGW29022.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.623
OGW29357.1
Hypothetical protein; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.
  
  
 0.616
OGW28939.1
DUF3185 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.563
OGW28699.1
4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.453
OGW28938.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     
 0.405
Your Current Organism:
Nitrospirae bacterium GWC25713
NCBI taxonomy Id: 1801697
Other names: N. bacterium GWC2_57_13, Nitrospirae bacterium GWC2_57_13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.