STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGW63592.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (240 aa)    
Predicted Functional Partners:
A2V83_09525
Hypothetical protein; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
OGW61678.1
Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.696
OGW60719.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.531
yidC
Hypothetical protein; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.
  
  
 0.518
OGW63593.1
Rod shape-determining protein; Functions in MreBCD complex in some organisms; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.471
OGW59991.1
Outer membrane protein assembly factor BamA; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.439
A2V83_02320
Hypothetical protein; Too many ambiguous residues; incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.436
rodA
Rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
       0.406
OGW63613.1
Penicillin-binding protein 2; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.403
OGW63594.1
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
       0.401
Your Current Organism:
Nitrospirae bacterium RBG166422
NCBI taxonomy Id: 1801708
Other names: N. bacterium RBG_16_64_22, Nitrospirae bacterium RBG_16_64_22
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