STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGW62454.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (76 aa)    
Predicted Functional Partners:
OGW63234.1
Plasmid stabilization system protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.545
OGW62453.1
Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
       0.515
vapC-10
Hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
       0.456
OGW62464.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.456
OGW62451.1
GxxExxY protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.447
OGW62455.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.438
Your Current Organism:
Nitrospirae bacterium RBG166422
NCBI taxonomy Id: 1801708
Other names: N. bacterium RBG_16_64_22, Nitrospirae bacterium RBG_16_64_22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.