STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGZ31415.1LPS biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (396 aa)    
Predicted Functional Partners:
hisH
Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.
 
 0.993
OGZ31485.1
Imidazole glycerol phosphate synthase subunit HisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.
      0.953
OGZ31419.1
UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.857
OGZ31416.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      0.845
OGZ31442.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.844
OGZ31417.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.803
OGZ31486.1
Polysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DegT/DnrJ/EryC1 family.
  
 
  0.794
OGZ31418.1
N-acetylneuraminate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.776
OGZ31413.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
OGZ31420.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.768
Your Current Organism:
Niyogibacteria bacterium RIFCSPLOWO202FULL4513
NCBI taxonomy Id: 1801725
Other names: C. Niyogibacteria bacterium RIFCSPLOWO2_02_FULL_45_13, Candidatus Niyogibacteria bacterium RIFCSPLOWO2_02_FULL_45_13
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