STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGI60443.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (136 aa)    
Predicted Functional Partners:
OGI60441.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
    0.814
OGI60317.1
Ribonucleoside-diphosphate reductase subunit alpha; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.785
OGI60442.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.779
glyA
Serine hydroxymethyltransferase; Catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.762
OGI60470.1
IMP dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.649
A2641_02940
Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.648
OGI60445.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.643
OGI60693.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
  0.609
OGI60501.1
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.603
OGI60752.1
CTP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.505
Your Current Organism:
Nomurabacteria bacterium RIFCSPHIGHO201FULL3725
NCBI taxonomy Id: 1801731
Other names: C. Nomurabacteria bacterium RIFCSPHIGHO2_01_FULL_37_25, Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_01_FULL_37_25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.