STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGI72950.150S ribosomal protein L20; Derived by automated computational analysis using gene prediction method: Protein Homology. (114 aa)    
Predicted Functional Partners:
OGI72766.1
30S ribosomal protein S18; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.999
OGI72768.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.999
OGI71870.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.999
OGI71872.1
30S ribosomal protein S12; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.999
OGI71873.1
30S ribosomal protein S7; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.999
OGI71887.1
30S ribosomal protein S14 type Z; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.999
OGI71896.1
30S ribosomal protein S8; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.999
OGI71888.1
50S ribosomal protein L6; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.999
OGI71889.1
50S ribosomal protein L18; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.999
OGI71890.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 
 0.999
Your Current Organism:
Nomurabacteria bacterium RIFCSPHIGHO2024118
NCBI taxonomy Id: 1801746
Other names: C. Nomurabacteria bacterium RIFCSPHIGHO2_02_41_18, Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_02_41_18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.