STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGI85342.1Zinc metalloprotease HtpX; Derived by automated computational analysis using gene prediction method: Protein Homology. (307 aa)    
Predicted Functional Partners:
OGI84918.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.785
OGI85343.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
OGI85344.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.745
OGI85361.1
glutaminyl-tRNA synthase (glutamine-hydrolyzing) subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.618
OGI84721.1
Molecular chaperone DnaJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.599
OGI85341.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.578
OGI85340.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.565
OGI85345.1
Protein-export membrane protein SecF; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.554
OGI85039.1
Cell division protein FtsH; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.549
OGI84707.1
Nucleotide exchange factor GrpE; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.497
Your Current Organism:
Nomurabacteria bacterium RIFCSPHIGHO212FULL4219
NCBI taxonomy Id: 1801762
Other names: C. Nomurabacteria bacterium RIFCSPHIGHO2_12_FULL_42_19, Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_12_FULL_42_19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.