STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGI90029.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (304 aa)    
Predicted Functional Partners:
OGI90030.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.997
OGI90049.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.988
OGI89693.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.936
OGI90028.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.745
OGI89483.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
0.730
OGI90027.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.549
OGI89998.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     
 0.548
OGI89076.1
IMP dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.434
OGI89567.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
   0.413
Your Current Organism:
Nomurabacteria bacterium RIFCSPLOWO201FULL4152b
NCBI taxonomy Id: 1801779
Other names: C. Nomurabacteria bacterium RIFCSPLOWO2_01_FULL_41_52b, Candidatus Nomurabacteria bacterium RIFCSPLOWO2_01_FULL_41_52b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.