STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGJ09903.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (331 aa)    
Predicted Functional Partners:
OGJ09905.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.716
OGJ09904.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.707
OGJ09902.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.589
OGJ09901.1
glutaminyl-tRNA synthase (glutamine-hydrolyzing) subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.576
OGJ09900.1
Fructose-bisphosphate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.548
OGJ09906.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.518
OGJ09907.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.464
OGJ09893.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
   0.435
OGJ09899.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.428
Your Current Organism:
Nomurabacteria bacterium RIFOXYC2FULL4316
NCBI taxonomy Id: 1801808
Other names: C. Nomurabacteria bacterium RIFOXYC2_FULL_43_16, Candidatus Nomurabacteria bacterium RIFOXYC2_FULL_43_16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.