STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGJ09992.1Transcription termination/antitermination protein NusG; Derived by automated computational analysis using gene prediction method: Protein Homology. (181 aa)    
Predicted Functional Partners:
OGJ10193.1
DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.997
OGJ09993.1
50S ribosomal protein L11; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.996
OGJ10190.1
DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.994
OGJ10010.1
30S ribosomal protein S3; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.992
OGJ09991.1
Preprotein translocase subunit SecE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.986
OGJ10018.1
50S ribosomal protein L6; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.984
OGJ10017.1
30S ribosomal protein S8; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.982
OGJ10011.1
50S ribosomal protein L16; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.979
A2443_03175
30S ribosomal protein S12; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.975
OGJ10042.1
30S ribosomal protein S10; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.974
Your Current Organism:
Nomurabacteria bacterium RIFOXYC2FULL4316
NCBI taxonomy Id: 1801808
Other names: C. Nomurabacteria bacterium RIFOXYC2_FULL_43_16, Candidatus Nomurabacteria bacterium RIFOXYC2_FULL_43_16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.