STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGW81708.1Riboflavin synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (199 aa)    
Predicted Functional Partners:
OGW81709.1
Riboflavin biosynthesis protein RibD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
OGW81712.1
Bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.999
OGW81711.1
6,7-dimethyl-8-ribityllumazine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
OGW79859.1
CoA-disulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.967
OGW81707.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.785
OGW81706.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
OGW79602.1
Riboflavin biosynthesis protein RibF; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.737
OGW81710.1
Transcription antitermination factor NusB; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.696
OGW80542.1
50S ribosomal protein L31; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.601
OGW82171.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
  0.545
Your Current Organism:
Omnitrophica bacterium RIFCSPHIGHO202FULL4528
NCBI taxonomy Id: 1801819
Other names: O. bacterium RIFCSPHIGHO2_02_FULL_45_28, Omnitrophica bacterium RIFCSPHIGHO2_02_FULL_45_28
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.