node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A2Z88_06730 | A2Z88_07300 | A2Z88_06730 | A2Z88_07300 | ATP-dependent Clp endopeptidase, proteolytic subunit ClpP; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology. | tRNA-Glu; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.629 |
A2Z88_06730 | OGX05961.1 | A2Z88_06730 | A2Z88_02710 | ATP-dependent Clp endopeptidase, proteolytic subunit ClpP; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.562 |
A2Z88_06730 | OGX08193.1 | A2Z88_06730 | A2Z88_03300 | ATP-dependent Clp endopeptidase, proteolytic subunit ClpP; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.630 |
A2Z88_06730 | glyA | A2Z88_06730 | A2Z88_08880 | ATP-dependent Clp endopeptidase, proteolytic subunit ClpP; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.683 |
A2Z88_07300 | A2Z88_06730 | A2Z88_07300 | A2Z88_06730 | tRNA-Glu; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | ATP-dependent Clp endopeptidase, proteolytic subunit ClpP; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.629 |
A2Z88_07300 | OGX05961.1 | A2Z88_07300 | A2Z88_02710 | tRNA-Glu; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.648 |
A2Z88_07300 | OGX06653.1 | A2Z88_07300 | A2Z88_11610 | tRNA-Glu; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.874 |
A2Z88_07300 | OGX08193.1 | A2Z88_07300 | A2Z88_03300 | tRNA-Glu; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.609 |
A2Z88_07300 | OGX08216.1 | A2Z88_07300 | A2Z88_09805 | tRNA-Glu; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | 0.613 |
A2Z88_07300 | glyA | A2Z88_07300 | A2Z88_08880 | tRNA-Glu; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.632 |
A2Z88_07300 | rplB | A2Z88_07300 | A2Z88_09785 | tRNA-Glu; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.667 |
A2Z88_07300 | rplF | A2Z88_07300 | A2Z88_09845 | tRNA-Glu; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.796 |
A2Z88_07300 | rplU | A2Z88_07300 | A2Z88_03245 | tRNA-Glu; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.665 |
A2Z88_07300 | rplV | A2Z88_07300 | A2Z88_09795 | tRNA-Glu; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.602 |
OGX05961.1 | A2Z88_06730 | A2Z88_02710 | A2Z88_06730 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent Clp endopeptidase, proteolytic subunit ClpP; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.562 |
OGX05961.1 | A2Z88_07300 | A2Z88_02710 | A2Z88_07300 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | tRNA-Glu; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.648 |
OGX05961.1 | OGX08193.1 | A2Z88_02710 | A2Z88_03300 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.468 |
OGX05961.1 | glyA | A2Z88_02710 | A2Z88_08880 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.492 |
OGX06653.1 | A2Z88_07300 | A2Z88_11610 | A2Z88_07300 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | tRNA-Glu; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.874 |
OGX08193.1 | A2Z88_06730 | A2Z88_03300 | A2Z88_06730 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent Clp endopeptidase, proteolytic subunit ClpP; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.630 |