STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGX09860.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (234 aa)    
Predicted Functional Partners:
OGX10570.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.791
OGX09847.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.697
OGX09846.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.687
OGX09704.1
F0F1 ATP synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.572
OGX09852.1
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.557
OGX09848.1
Fumarate hydratase, class II; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.550
A2Y05_02785
Hydrogenase expression/formation protein HypE; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
  0.504
OGX09686.1
F0F1 ATP synthase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.497
OGX10046.1
3-oxoacyl-[acyl-carrier-protein] reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.475
OGX10050.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.475
Your Current Organism:
Omnitrophica WOR2 bacterium GWA25343
NCBI taxonomy Id: 1801841
Other names: O. WOR_2 bacterium GWA2_53_43, Omnitrophica WOR_2 bacterium GWA2_53_43
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.